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USC-OGP 2-DE database
Two-dimensional polyacrylamide gel electrophoresis database
USC-OGP 2-DE database
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Searching in 'USC-OGP 2-DE database' for entry
matching:
P43897
USC-OGP 2-DE database
:
P43897
P43897
General information about the entry
View entry in simple text format
Entry name
EFTS_HUMAN
Primary accession number
P43897
integrated into USC-OGP 2-DE database on
January 17, 2017 (release 1)
2D Annotations were last modified on
January 17, 2017 (version 1)
General Annotations were last modified on
April 5, 2017 (version 2)
Name and origin of the protein
Description
RecName: Full=Elongation factor Ts, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-TsMt {ECO:0000255|HAMAP-Rule:MF_03135}; Flags: Precursor;.
Gene name
Name=TSFM
{ECO:0000255|HAMAP-Rule:MF_03135}
Annotated species
Homo sapiens (Human) [TaxID:
9606
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]
2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein
UVEAL_MELANOMA_3-10
{UVEAL MELANOMA 3-10}
Homo sapiens (Human)
map experimental info
UVEAL_MELANOMA_3-10
MAP LOCATIONS:
SPOT OGP-1249
:
pI=6.60; Mw=31413
Cross-references
UniProtKB/Swiss-Prot
P43897; EFTS_HUMAN.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
0.0
Entry name
EFTS_HUMAN
Primary accession number
P43897
Secondary accession number(s)
B4E391 F5H2T7 Q561V7 Q8TBC2 Q9UQK0
Sequence was last modified on
January 11, 2001 (version 2)
Annotations were last modified on
March 15, 2017 (version 171)
Name and origin of the protein
Description
RecName: Full=Elongation factor Ts, mitochondrial {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_03135}; Short=EF-TsMt {ECO:0000255|HAMAP-Rule:MF_03135}; Flags: Precursor;
Gene name
Name=TSFM
{ECO:0000255|HAMAP-Rule:MF_03135}
Encoded on
Name=TSFM {ECO:0000255|HAMAP-Rule:MF_03135
Keywords
3D-structure
;
Alternative splicing
;
Cardiomyopathy
;
Complete proteome
;
Disease mutation
;
Elongation factor
;
Mitochondrion
;
Phosphoprotein
;
Protein biosynthesis
;
Reference proteome
;
Transit peptide
.
Copyright
Copyrighted by the UniProt Consortium, see
http://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AF110399; AAD20224.1
; -; mRNA
EMBL
AK304621; BAG65403.1
; -; mRNA
EMBL
AK308981; -
; NOT_ANNOTATED_CDS; mRNA
EMBL
AC025165; -
; NOT_ANNOTATED_CDS; Genomic_DNA
EMBL
CH471054; EAW97075.1
; -; Genomic_DNA
EMBL
BC022862; AAH22862.1
; -; mRNA
EMBL
BC093068; AAH93068.1
; -; mRNA
EMBL
L37936; AAC37577.1
; -; mRNA
CCDS
CCDS53809.1; -. [P43897-2]
; .
CCDS
CCDS53810.1; -. [P43897-4]
; .
CCDS
CCDS53811.1; -. [P43897-3]
; .
CCDS
CCDS8958.2; -. [P43897-1]
; .
PIR
I84606; I84606
; .
RefSeq
NP_001166166.1; NM_001172695.1. [P43897-3]
; .
RefSeq
NP_001166167.1; NM_001172696.1. [P43897-2]
; .
RefSeq
NP_001166168.1; NM_001172697.1. [P43897-4]
; .
RefSeq
NP_005717.3; NM_005726.5. [P43897-1]
; .
UniGene
Hs.632704; -
; .
PDB
2CP9; NMR
; -; A=45-95
PDBsum
2CP9; -
; .
ProteinModelPortal
P43897; -
; .
SMR
P43897; -
; .
BioGrid
115409; 26
; .
IntAct
P43897; 13
; .
MINT
MINT-3297563; -
; .
iPTMnet
P43897; -
; .
PhosphoSitePlus
P43897; -
; .
BioMuta
TSFM; -
; .
DMDM
12644268; -
; .
EPD
P43897; -
; .
MaxQB
P43897; -
; .
PeptideAtlas
P43897; -
; .
PRIDE
P43897; -
; .
Ensembl
ENST00000323833; ENSP00000313877
; ENSG00000123297. [P43897-2]; .
Ensembl
ENST00000454289; ENSP00000388330
; ENSG00000123297. [P43897-1]; .
Ensembl
ENST00000540550; ENSP00000440987
; ENSG00000123297. [P43897-3]; .
Ensembl
ENST00000543727; ENSP00000439342
; ENSG00000123297. [P43897-4]; .
GeneID
10102; -
; .
KEGG
hsa:10102; -
; .
UCSC
uc001sqh.4; human. [P43897-1]
; .
CTD
10102; -
; .
DisGeNET
10102; -
; .
GeneCards
TSFM; -
; .
HGNC
HGNC:12367; TSFM
; .
HPA
HPA006204; -
; .
MalaCards
TSFM; -
; .
MIM
604723; gene
; .
MIM
610505; phenotype
; .
neXtProt
NX_P43897; -
; .
OpenTargets
ENSG00000123297; -
; .
Orphanet
168566; Fatal mitochondrial disease due to combined oxidative phosphorylation deficiency 3
; .
PharmGKB
PA37037; -
; .
GeneTree
ENSGT00390000016293; -
; .
HOGENOM
HOG000220988; -
; .
HOVERGEN
HBG005571; -
; .
InParanoid
P43897; -
; .
KO
K02357; -
; .
OMA
LVICETS; -
; .
OrthoDB
EOG091G0E11; -
; .
PhylomeDB
P43897; -
; .
TreeFam
TF314154; -
; .
Reactome
R-HSA-5389840; Mitochondrial translation elongation
; .
EvolutionaryTrace
P43897; -
; .
GeneWiki
TSFM; -
; .
GenomeRNAi
10102; -
; .
PRO
PR:P43897; -
; .
Proteomes
UP000005640; Chromosome 12
; .
Bgee
ENSG00000123297; -
; .
CleanEx
HS_TSFM; -
; .
ExpressionAtlas
P43897; baseline and differential
; .
Genevisible
P43897; HS
; .
GO
GO:0005759; C:mitochondrial matrix
; IBA:GO_Central; .
GO
GO:0005739; C:mitochondrion
; IDA:HPA; .
GO
GO:0005634; C:nucleus
; IDA:HPA; .
GO
GO:0003723; F:RNA binding
; IDA:UniProtKB; .
GO
GO:0003746; F:translation elongation factor activity
; IBA:GO_Central; .
GO
GO:0070125; P:mitochondrial translational elongation
; IBA:GO_Central; .
GO
GO:0032784; P:regulation of DNA-templated transcription
; elongation; TAS:ProtInc
GO
GO:0070129; P:regulation of mitochondrial translation
; IDA:UniProtKB; .
GO
GO:0006414; P:translational elongation
; TAS:ProtInc; .
Gene3D
3.30.479.20; -
; 2; .
HAMAP
MF_00050; EF_Ts
; 1; .
InterPro
IPR001816; Transl_elong_EFTs/EF1B
; .
InterPro
IPR014039; Transl_elong_EFTs/EF1B_dimer
; .
InterPro
IPR018101; Transl_elong_Ts_CS
; .
InterPro
IPR009060; UBA-like
; .
PANTHER
PTHR11741; PTHR11741
; 1; .
Pfam
PF00889; EF_TS
; 1; .
SUPFAM
SSF46934; SSF46934
; 1; .
SUPFAM
SSF54713; SSF54713
; 2; .
PROSITE
PS01126; EF_TS_1
; 1; .
PROSITE
PS01127; EF_TS_2
; 1; .
Gateways to other related servers
The World-2DPAGE Constellation
- Entry point to the world-wide 2-DPAGE resources.
World-2DPAGE Repository
- A public repository for gel-based proteomics data linked to protein identification published in the literature.
World-2DPAGE Portal
- A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
SWISS-2DPAGE
- The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
ExPASy
- The resources web server of the
Swiss Institute of Bioinformatics
Database constructed and maintained by
Angel Garcia
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server
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